Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 AP000845.1-201ENST00000581677 2131 ntBASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 AC044860.1-202ENST00000559481 777 ntBASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 AC025181.2-201ENST00000606994 802 ntBASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 FGD5P1-202ENST00000614866 2498 ntBASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD1LQ86WJ1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 ACE3P-201ENST00000423435 1973 ntBASIC19.23■□□□□ 0.67
CHD1LQ86WJ1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 TREML5P-201ENST00000421694 576 ntBASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 ZNF890P-202ENST00000530367 1156 ntBASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 AL158211.3-201ENST00000607385 239 ntBASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 AL590560.3-201ENST00000623350 461 ntBASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHD1LQ86WJ1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms