Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 AC023824.1-201ENST00000562945 2975 ntBASIC18.47■□□□□ 0.55
CTR9Q6PD62 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 AC105250.1-201ENST00000509378 2057 ntBASIC18.47■□□□□ 0.55
CTR9Q6PD62 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 MIR5189-201ENST00000577370 114 ntBASIC18.47■□□□□ 0.55
CTR9Q6PD62 AL162274.1-201ENST00000617191 1098 ntBASIC18.47■□□□□ 0.55
CTR9Q6PD62 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 AC005252.2-201ENST00000624630 1141 ntBASIC18.47■□□□□ 0.55
CTR9Q6PD62 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.47■□□□□ 0.55
CTR9Q6PD62 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTR9Q6PD62 AC084364.1-201ENST00000551967 1556 ntBASIC18.47■□□□□ 0.55
CTR9Q6PD62 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 OR8S1-201ENST00000310194 1080 ntBASIC18.46■□□□□ 0.55
CTR9Q6PD62 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 USP32P1-208ENST00000506594 1164 ntBASIC18.46■□□□□ 0.55
CTR9Q6PD62 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.46■□□□□ 0.55
CTR9Q6PD62 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTR9Q6PD62 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CTR9Q6PD62 HYMAI-201ENST00000635591 3347 ntBASIC18.46■□□□□ 0.55
CTR9Q6PD62 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CTR9Q6PD62 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.46■□□□□ 0.54
CTR9Q6PD62 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CTR9Q6PD62 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
CTR9Q6PD62 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.45■□□□□ 0.54
CTR9Q6PD62 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms