Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SGO1Q5FBB7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 RN7SL828P-201ENST00000607615 303 ntBASIC15.22■□□□□ 0.03
SGO1Q5FBB7 AL596442.2-201ENST00000610240 980 ntBASIC15.22■□□□□ 0.03
SGO1Q5FBB7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.22■□□□□ 0.03
SGO1Q5FBB7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SGO1Q5FBB7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.21■□□□□ 0.03
SGO1Q5FBB7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 AC023141.5-201ENST00000458585 616 ntBASIC15.21■□□□□ 0.03
SGO1Q5FBB7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 AC009093.7-201ENST00000623853 1223 ntBASIC15.21■□□□□ 0.03
SGO1Q5FBB7 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SGO1Q5FBB7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.21■□□□□ 0.02
SGO1Q5FBB7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SGO1Q5FBB7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SGO1Q5FBB7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SGO1Q5FBB7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SGO1Q5FBB7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SGO1Q5FBB7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms