Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.13■□□□□ 0.33
NFX1Q12986 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.13■□□□□ 0.33
NFX1Q12986 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NFX1Q12986 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NFX1Q12986 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NFX1Q12986 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NFX1Q12986 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.12■□□□□ 0.33
NFX1Q12986 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.12■□□□□ 0.33
NFX1Q12986 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 FAM86MP-201ENST00000340703 885 ntBASIC17.12■□□□□ 0.33
NFX1Q12986 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NFX1Q12986 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.12■□□□□ 0.33
NFX1Q12986 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.12■□□□□ 0.33
NFX1Q12986 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.12■□□□□ 0.33
NFX1Q12986 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.12■□□□□ 0.33
NFX1Q12986 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NFX1Q12986 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.12■□□□□ 0.33
NFX1Q12986 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.12■□□□□ 0.33
NFX1Q12986 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NFX1Q12986 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.12■□□□□ 0.33
NFX1Q12986 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.12■□□□□ 0.33
NFX1Q12986 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.12■□□□□ 0.33
NFX1Q12986 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NFX1Q12986 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.12■□□□□ 0.33
NFX1Q12986 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NFX1Q12986 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NFX1Q12986 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NFX1Q12986 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.11■□□□□ 0.33
NFX1Q12986 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NFX1Q12986 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NFX1Q12986 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NFX1Q12986 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NFX1Q12986 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.11■□□□□ 0.33
NFX1Q12986 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.11■□□□□ 0.33
NFX1Q12986 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.11■□□□□ 0.33
NFX1Q12986 FTH1P14-201ENST00000482930 551 ntBASIC17.11■□□□□ 0.33
NFX1Q12986 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.11■□□□□ 0.33
NFX1Q12986 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NFX1Q12986 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.11■□□□□ 0.33
NFX1Q12986 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.11■□□□□ 0.33
NFX1Q12986 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 DRD5P1-201ENST00000456605 1438 ntBASIC17.11■□□□□ 0.33
NFX1Q12986 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFX1Q12986 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NFX1Q12986 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.11■□□□□ 0.33
NFX1Q12986 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.1■□□□□ 0.33
NFX1Q12986 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.1■□□□□ 0.33
NFX1Q12986 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NFX1Q12986 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.1■□□□□ 0.33
NFX1Q12986 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.1■□□□□ 0.33
NFX1Q12986 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.1■□□□□ 0.33
NFX1Q12986 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.1■□□□□ 0.33
NFX1Q12986 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NFX1Q12986 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NFX1Q12986 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.1■□□□□ 0.33
NFX1Q12986 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.1■□□□□ 0.33
NFX1Q12986 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NFX1Q12986 AC092933.1-201ENST00000393644 945 ntBASIC17.1■□□□□ 0.33
NFX1Q12986 AC099336.1-201ENST00000417053 1171 ntBASIC17.1■□□□□ 0.33
NFX1Q12986 RPL7P3-201ENST00000441388 714 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms