Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.56□□□□□ -0.08
CD47Q08722 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.56□□□□□ -0.08
CD47Q08722 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.56□□□□□ -0.08
CD47Q08722 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD47Q08722 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD47Q08722 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD47Q08722 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD47Q08722 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CD47Q08722 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 AC079781.5-202ENST00000641784 3743 ntBASIC14.55□□□□□ -0.08
CD47Q08722 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
CD47Q08722 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
CD47Q08722 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.55□□□□□ -0.08
CD47Q08722 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.55□□□□□ -0.08
CD47Q08722 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.55□□□□□ -0.08
CD47Q08722 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CD47Q08722 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.55□□□□□ -0.08
CD47Q08722 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.55□□□□□ -0.08
CD47Q08722 AC092865.6-201ENST00000642101 219 ntBASIC14.55□□□□□ -0.08
CD47Q08722 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD47Q08722 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD47Q08722 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CD47Q08722 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CD47Q08722 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.55□□□□□ -0.08
CD47Q08722 AC073439.1-201ENST00000624121 1774 ntBASIC14.55□□□□□ -0.08
CD47Q08722 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD47Q08722 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CD47Q08722 AL365209.1-201ENST00000624418 6473 ntBASIC14.54□□□□□ -0.08
CD47Q08722 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CD47Q08722 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CD47Q08722 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 MIR4321-201ENST00000592276 80 ntBASIC14.54□□□□□ -0.08
CD47Q08722 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CD47Q08722 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.54□□□□□ -0.08
CD47Q08722 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CD47Q08722 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.54□□□□□ -0.08
CD47Q08722 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD47Q08722 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CD47Q08722 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD47Q08722 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms