Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE4BQ07343 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDE4BQ07343 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.4■□□□□ 0.54
PDE4BQ07343 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE4BQ07343 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDE4BQ07343 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.39■□□□□ 0.54
PDE4BQ07343 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
PDE4BQ07343 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PDE4BQ07343 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.39■□□□□ 0.54
PDE4BQ07343 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDE4BQ07343 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDE4BQ07343 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 AC092384.3-202ENST00000564646 2873 ntBASIC18.39■□□□□ 0.53
PDE4BQ07343 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PDE4BQ07343 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE4BQ07343 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PDE4BQ07343 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.39■□□□□ 0.53
PDE4BQ07343 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.39■□□□□ 0.53
PDE4BQ07343 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE4BQ07343 TTTY23B-201ENST00000442790 549 ntBASIC18.39■□□□□ 0.53
PDE4BQ07343 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
PDE4BQ07343 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE4BQ07343 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.39■□□□□ 0.53
PDE4BQ07343 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PDE4BQ07343 AC093813.1-201ENST00000605066 256 ntBASIC18.39■□□□□ 0.53
PDE4BQ07343 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.39■□□□□ 0.53
PDE4BQ07343 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.39■□□□□ 0.53
PDE4BQ07343 FER1L4-210ENST00000615531 5998 ntBASIC18.39■□□□□ 0.53
PDE4BQ07343 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.39■□□□□ 0.53
PDE4BQ07343 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PDE4BQ07343 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.39■□□□□ 0.53
PDE4BQ07343 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDE4BQ07343 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE4BQ07343 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.39■□□□□ 0.53
PDE4BQ07343 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 AC084364.1-201ENST00000551967 1556 ntBASIC18.38■□□□□ 0.53
PDE4BQ07343 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.38■□□□□ 0.53
PDE4BQ07343 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.38■□□□□ 0.53
PDE4BQ07343 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDE4BQ07343 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDE4BQ07343 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDE4BQ07343 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.38■□□□□ 0.53
PDE4BQ07343 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.38■□□□□ 0.53
PDE4BQ07343 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.38■□□□□ 0.53
PDE4BQ07343 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.38■□□□□ 0.53
PDE4BQ07343 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.38■□□□□ 0.53
PDE4BQ07343 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 AC010319.3-201ENST00000597028 470 ntBASIC18.38■□□□□ 0.53
PDE4BQ07343 AC025181.2-201ENST00000606994 802 ntBASIC18.38■□□□□ 0.53
PDE4BQ07343 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.38■□□□□ 0.53
PDE4BQ07343 AC107373.2-201ENST00000607735 490 ntBASIC18.38■□□□□ 0.53
PDE4BQ07343 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE4BQ07343 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE4BQ07343 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDE4BQ07343 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDE4BQ07343 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PDE4BQ07343 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE4BQ07343 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE4BQ07343 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE4BQ07343 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PDE4BQ07343 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE4BQ07343 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDE4BQ07343 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE4BQ07343 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.37■□□□□ 0.53
PDE4BQ07343 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDE4BQ07343 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE4BQ07343 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE4BQ07343 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE4BQ07343 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDE4BQ07343 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE4BQ07343 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE4BQ07343 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE4BQ07343 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE4BQ07343 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE4BQ07343 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE4BQ07343 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms