Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL10A1Q03692 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL10A1Q03692 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.23□□□□□ -0.29
COL10A1Q03692 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
COL10A1Q03692 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.23□□□□□ -0.29
COL10A1Q03692 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.23□□□□□ -0.29
COL10A1Q03692 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL10A1Q03692 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.22□□□□□ -0.29
COL10A1Q03692 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.22□□□□□ -0.29
COL10A1Q03692 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.22□□□□□ -0.29
COL10A1Q03692 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.22□□□□□ -0.29
COL10A1Q03692 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.22□□□□□ -0.29
COL10A1Q03692 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
COL10A1Q03692 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
COL10A1Q03692 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.22□□□□□ -0.29
COL10A1Q03692 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.22□□□□□ -0.29
COL10A1Q03692 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.22□□□□□ -0.29
COL10A1Q03692 AC140878.1-201ENST00000565277 250 ntBASIC13.22□□□□□ -0.29
COL10A1Q03692 AC015911.4-201ENST00000588022 1070 ntBASIC13.22□□□□□ -0.29
COL10A1Q03692 AL033527.5-202ENST00000641632 1098 ntBASIC13.22□□□□□ -0.29
COL10A1Q03692 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 AC013268.4-201ENST00000637413 2228 ntBASIC13.22□□□□□ -0.29
COL10A1Q03692 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.22□□□□□ -0.29
COL10A1Q03692 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
COL10A1Q03692 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
COL10A1Q03692 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.22□□□□□ -0.29
COL10A1Q03692 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL10A1Q03692 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.21□□□□□ -0.29
COL10A1Q03692 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.21□□□□□ -0.29
COL10A1Q03692 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
COL10A1Q03692 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
COL10A1Q03692 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
COL10A1Q03692 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
COL10A1Q03692 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 TARDBPP1-201ENST00000442013 1203 ntBASIC13.21□□□□□ -0.29
COL10A1Q03692 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 AC027369.6-201ENST00000525520 931 ntBASIC13.21□□□□□ -0.29
COL10A1Q03692 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.21□□□□□ -0.29
COL10A1Q03692 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.21□□□□□ -0.29
COL10A1Q03692 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.21□□□□□ -0.29
COL10A1Q03692 AC051619.7-201ENST00000568314 623 ntBASIC13.21□□□□□ -0.29
COL10A1Q03692 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.21□□□□□ -0.29
COL10A1Q03692 TEX28P1-201ENST00000613479 1221 ntBASIC13.21□□□□□ -0.29
COL10A1Q03692 TEX28P2-201ENST00000617764 1221 ntBASIC13.21□□□□□ -0.29
COL10A1Q03692 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.21□□□□□ -0.29
COL10A1Q03692 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.21□□□□□ -0.29
COL10A1Q03692 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
COL10A1Q03692 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
COL10A1Q03692 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
COL10A1Q03692 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
COL10A1Q03692 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
COL10A1Q03692 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.21□□□□□ -0.3
COL10A1Q03692 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
COL10A1Q03692 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
COL10A1Q03692 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms