Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-1P78426 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-1P78426 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NKX6-1P78426 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-1P78426 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-1P78426 HAUS4P1-201ENST00000406739 1145 ntBASIC13.83□□□□□ -0.2
NKX6-1P78426 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 MEP1AP4-201ENST00000423244 1087 ntBASIC13.83□□□□□ -0.2
NKX6-1P78426 EEF1DP4-201ENST00000446006 880 ntBASIC13.83□□□□□ -0.2
NKX6-1P78426 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX6-1P78426 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX6-1P78426 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-1P78426 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 AC044860.1-202ENST00000559481 777 ntBASIC13.83□□□□□ -0.2
NKX6-1P78426 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX6-1P78426 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-1P78426 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-1P78426 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.83□□□□□ -0.2
NKX6-1P78426 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-1P78426 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-1P78426 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX6-1P78426 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-1P78426 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.83□□□□□ -0.2
NKX6-1P78426 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-1P78426 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX6-1P78426 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-1P78426 AP001282.1-201ENST00000531301 1499 ntBASIC13.82□□□□□ -0.2
NKX6-1P78426 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX6-1P78426 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX6-1P78426 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX6-1P78426 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-1P78426 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.82□□□□□ -0.2
NKX6-1P78426 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.82□□□□□ -0.2
NKX6-1P78426 MYCLP2-201ENST00000449268 967 ntBASIC13.82□□□□□ -0.2
NKX6-1P78426 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX6-1P78426 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NKX6-1P78426 AL512361.1-201ENST00000554200 418 ntBASIC13.82□□□□□ -0.2
NKX6-1P78426 AP005482.1-201ENST00000563722 1273 ntBASIC13.82□□□□□ -0.2
NKX6-1P78426 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.82□□□□□ -0.2
NKX6-1P78426 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 AL512343.1-201ENST00000605837 169 ntBASIC13.82□□□□□ -0.2
NKX6-1P78426 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 AL033527.5-202ENST00000641632 1098 ntBASIC13.82□□□□□ -0.2
NKX6-1P78426 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
NKX6-1P78426 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX6-1P78426 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
NKX6-1P78426 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 AC104640.1-201ENST00000562617 2109 ntBASIC13.82□□□□□ -0.2
NKX6-1P78426 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NKX6-1P78426 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NKX6-1P78426 AC092364.2-201ENST00000596710 2692 ntBASIC13.82□□□□□ -0.2
NKX6-1P78426 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
NKX6-1P78426 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX6-1P78426 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX6-1P78426 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.81□□□□□ -0.2
NKX6-1P78426 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms