Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
RPL39P62891 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
RPL39P62891 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.08□□□□□ -0.64
RPL39P62891 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.08□□□□□ -0.64
RPL39P62891 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.08□□□□□ -0.64
RPL39P62891 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 PRYP6-201ENST00000514804 343 ntBASIC11.08□□□□□ -0.64
RPL39P62891 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.08□□□□□ -0.64
RPL39P62891 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.08□□□□□ -0.64
RPL39P62891 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.08□□□□□ -0.64
RPL39P62891 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 AL691432.1-201ENST00000596308 1422 ntBASIC11.08□□□□□ -0.64
RPL39P62891 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPL39P62891 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RPL39P62891 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.08□□□□□ -0.64
RPL39P62891 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.07□□□□□ -0.64
RPL39P62891 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.07□□□□□ -0.64
RPL39P62891 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RPL39P62891 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RPL39P62891 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPL39P62891 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms