Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH8P55286 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 DRD5P1-201ENST00000456605 1438 ntBASIC16.6■□□□□ 0.25
CDH8P55286 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH8P55286 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CDH8P55286 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH8P55286 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH8P55286 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH8P55286 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH8P55286 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH8P55286 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH8P55286 AC027307.3-201ENST00000594262 1100 ntBASIC16.59■□□□□ 0.25
CDH8P55286 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH8P55286 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH8P55286 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH8P55286 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH8P55286 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH8P55286 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH8P55286 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH8P55286 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CDH8P55286 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH8P55286 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDH8P55286 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDH8P55286 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH8P55286 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDH8P55286 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH8P55286 AL162727.3-201ENST00000635661 2787 ntBASIC16.58■□□□□ 0.25
CDH8P55286 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH8P55286 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH8P55286 AC134915.1-201ENST00000426461 574 ntBASIC16.58■□□□□ 0.24
CDH8P55286 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH8P55286 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH8P55286 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH8P55286 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.58■□□□□ 0.24
CDH8P55286 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CDH8P55286 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH8P55286 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH8P55286 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH8P55286 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH8P55286 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDH8P55286 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH8P55286 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH8P55286 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms