Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HADHBP55084 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.27■□□□□ 0.19
HADHBP55084 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HADHBP55084 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HADHBP55084 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
HADHBP55084 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HADHBP55084 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HADHBP55084 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.26■□□□□ 0.19
HADHBP55084 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.26■□□□□ 0.19
HADHBP55084 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HADHBP55084 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.26■□□□□ 0.19
HADHBP55084 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.26■□□□□ 0.19
HADHBP55084 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.26■□□□□ 0.19
HADHBP55084 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 ZNF890P-202ENST00000530367 1156 ntBASIC16.26■□□□□ 0.19
HADHBP55084 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 SPDYE12P-201ENST00000618416 771 ntBASIC16.26■□□□□ 0.19
HADHBP55084 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HADHBP55084 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.26■□□□□ 0.19
HADHBP55084 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.25■□□□□ 0.19
HADHBP55084 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HADHBP55084 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HADHBP55084 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HADHBP55084 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.25■□□□□ 0.19
HADHBP55084 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HADHBP55084 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.25■□□□□ 0.19
HADHBP55084 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.25■□□□□ 0.19
HADHBP55084 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.25■□□□□ 0.19
HADHBP55084 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.25■□□□□ 0.19
HADHBP55084 SDHAP3-202ENST00000515467 728 ntBASIC16.25■□□□□ 0.19
HADHBP55084 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.25■□□□□ 0.19
HADHBP55084 AC051619.7-201ENST00000568314 623 ntBASIC16.25■□□□□ 0.19
HADHBP55084 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.25■□□□□ 0.19
HADHBP55084 AC027612.4-201ENST00000605371 583 ntBASIC16.25■□□□□ 0.19
HADHBP55084 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.25■□□□□ 0.19
HADHBP55084 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.25■□□□□ 0.19
HADHBP55084 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.25■□□□□ 0.19
HADHBP55084 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.25■□□□□ 0.19
HADHBP55084 AC007787.1-201ENST00000588095 1583 ntBASIC16.25■□□□□ 0.19
HADHBP55084 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HADHBP55084 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.25■□□□□ 0.19
HADHBP55084 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.25■□□□□ 0.19
HADHBP55084 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HADHBP55084 GRK6P1-201ENST00000400595 1711 ntBASIC16.25■□□□□ 0.19
HADHBP55084 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.25■□□□□ 0.19
HADHBP55084 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HADHBP55084 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms