Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.98■□□□□ 0.63
NUP98P52948 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUP98P52948 SHC1P1-201ENST00000425230 1745 ntBASIC18.98■□□□□ 0.63
NUP98P52948 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUP98P52948 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.98■□□□□ 0.63
NUP98P52948 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUP98P52948 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 AC106794.1-201ENST00000506935 792 ntBASIC18.97■□□□□ 0.63
NUP98P52948 AC245884.6-201ENST00000515672 1067 ntBASIC18.97■□□□□ 0.63
NUP98P52948 RN7SL774P-201ENST00000577467 290 ntBASIC18.97■□□□□ 0.63
NUP98P52948 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.97■□□□□ 0.63
NUP98P52948 AC138696.2-201ENST00000607376 223 ntBASIC18.97■□□□□ 0.63
NUP98P52948 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.97■□□□□ 0.63
NUP98P52948 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NUP98P52948 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.97■□□□□ 0.63
NUP98P52948 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NUP98P52948 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.97■□□□□ 0.63
NUP98P52948 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NUP98P52948 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.97■□□□□ 0.63
NUP98P52948 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 DPM3-202ENST00000368399 517 ntBASIC18.97■□□□□ 0.63
NUP98P52948 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.97■□□□□ 0.63
NUP98P52948 HINT2P1-201ENST00000419438 481 ntBASIC18.97■□□□□ 0.63
NUP98P52948 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NUP98P52948 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.97■□□□□ 0.63
NUP98P52948 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 FGFR3P5-201ENST00000564496 886 ntBASIC18.97■□□□□ 0.63
NUP98P52948 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.97■□□□□ 0.63
NUP98P52948 AC090164.2-201ENST00000611487 516 ntBASIC18.97■□□□□ 0.63
NUP98P52948 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.97■□□□□ 0.63
NUP98P52948 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.97■□□□□ 0.63
NUP98P52948 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP98P52948 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.96■□□□□ 0.63
NUP98P52948 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NUP98P52948 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NUP98P52948 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
NUP98P52948 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.96■□□□□ 0.63
NUP98P52948 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.96■□□□□ 0.63
NUP98P52948 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.96■□□□□ 0.63
NUP98P52948 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.96■□□□□ 0.63
NUP98P52948 RN7SL11P-201ENST00000471305 293 ntBASIC18.96■□□□□ 0.63
NUP98P52948 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.96■□□□□ 0.63
NUP98P52948 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
NUP98P52948 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NUP98P52948 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
NUP98P52948 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 AC087481.3-201ENST00000602886 1894 ntBASIC18.96■□□□□ 0.63
NUP98P52948 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP98P52948 AP003680.1-201ENST00000598970 3660 ntBASIC18.95■□□□□ 0.62
NUP98P52948 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUP98P52948 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.95■□□□□ 0.62
NUP98P52948 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.95■□□□□ 0.62
NUP98P52948 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.95■□□□□ 0.62
NUP98P52948 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.95■□□□□ 0.62
NUP98P52948 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.95■□□□□ 0.62
NUP98P52948 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.95■□□□□ 0.62
NUP98P52948 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP98P52948 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP98P52948 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NUP98P52948 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.95■□□□□ 0.62
NUP98P52948 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
NUP98P52948 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NUP98P52948 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUP98P52948 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUP98P52948 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP98P52948 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NUP98P52948 FXNP2-201ENST00000411625 547 ntBASIC18.95■□□□□ 0.62
NUP98P52948 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.95■□□□□ 0.62
NUP98P52948 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.95■□□□□ 0.62
NUP98P52948 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.95■□□□□ 0.62
NUP98P52948 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.95■□□□□ 0.62
NUP98P52948 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.95■□□□□ 0.62
NUP98P52948 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUP98P52948 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms