Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN3P26045 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN3P26045 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN3P26045 KRT18P43-201ENST00000469825 1281 ntBASIC15.9■□□□□ 0.14
PTPN3P26045 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.9■□□□□ 0.14
PTPN3P26045 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN3P26045 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN3P26045 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN3P26045 AC092337.1-201ENST00000568699 1129 ntBASIC15.9■□□□□ 0.14
PTPN3P26045 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 AC008738.7-201ENST00000609744 511 ntBASIC15.9■□□□□ 0.14
PTPN3P26045 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
PTPN3P26045 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN3P26045 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PTPN3P26045 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.9■□□□□ 0.14
PTPN3P26045 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PTPN3P26045 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTPN3P26045 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
PTPN3P26045 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.9■□□□□ 0.14
PTPN3P26045 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN3P26045 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
PTPN3P26045 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PTPN3P26045 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PTPN3P26045 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN3P26045 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN3P26045 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PTPN3P26045 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTPN3P26045 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.89■□□□□ 0.13
PTPN3P26045 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PTPN3P26045 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.89■□□□□ 0.13
PTPN3P26045 SPDYE18-201ENST00000510091 1050 ntBASIC15.89■□□□□ 0.13
PTPN3P26045 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN3P26045 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.89■□□□□ 0.13
PTPN3P26045 RFPL4AP1-201ENST00000530883 850 ntBASIC15.89■□□□□ 0.13
PTPN3P26045 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.89■□□□□ 0.13
PTPN3P26045 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PTPN3P26045 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN3P26045 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN3P26045 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN3P26045 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN3P26045 BTBD7P1-201ENST00000447253 1453 ntBASIC15.89■□□□□ 0.13
PTPN3P26045 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN3P26045 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN3P26045 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN3P26045 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN3P26045 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 AC022144.1-201ENST00000602255 1580 ntBASIC15.88■□□□□ 0.13
PTPN3P26045 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN3P26045 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PTPN3P26045 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 PMS2P2-201ENST00000425039 1128 ntBASIC15.88■□□□□ 0.13
PTPN3P26045 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PTPN3P26045 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms