Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CDH1P12830 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH1P12830 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH1P12830 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH1P12830 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 AC104581.4-201ENST00000623126 3052 ntBASIC15.25■□□□□ 0.03
CDH1P12830 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 CICP24-201ENST00000605464 2705 ntBASIC15.25■□□□□ 0.03
CDH1P12830 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 AC087499.5-201ENST00000452760 1342 ntBASIC15.25■□□□□ 0.03
CDH1P12830 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDH1P12830 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH1P12830 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH1P12830 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH1P12830 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH1P12830 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH1P12830 AC241585.1-201ENST00000433527 519 ntBASIC15.25■□□□□ 0.03
CDH1P12830 CYMP-203ENST00000474680 1263 ntBASIC15.25■□□□□ 0.03
CDH1P12830 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH1P12830 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CDH1P12830 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH1P12830 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH1P12830 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH1P12830 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.25■□□□□ 0.03
CDH1P12830 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH1P12830 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH1P12830 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH1P12830 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 AL844908.2-201ENST00000609461 460 ntBASIC15.25■□□□□ 0.03
CDH1P12830 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH1P12830 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH1P12830 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH1P12830 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH1P12830 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CDH1P12830 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CDH1P12830 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CDH1P12830 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH1P12830 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH1P12830 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH1P12830 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH1P12830 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH1P12830 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH1P12830 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH1P12830 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH1P12830 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH1P12830 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH1P12830 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.24■□□□□ 0.03
CDH1P12830 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH1P12830 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH1P12830 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH1P12830 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH1P12830 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH1P12830 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH1P12830 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH1P12830 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 AC025048.3-201ENST00000590609 569 ntBASIC15.24■□□□□ 0.03
CDH1P12830 AC005498.2-205ENST00000593218 784 ntBASIC15.24■□□□□ 0.03
CDH1P12830 AC005702.4-201ENST00000618393 416 ntBASIC15.24■□□□□ 0.03
CDH1P12830 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH1P12830 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms