Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 HCG4-201ENST00000418983 998 ntBASIC12.15□□□□□ -0.46
CXCL1P09341 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.15□□□□□ -0.46
CXCL1P09341 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 TOB2P1-201ENST00000469761 992 ntBASIC12.15□□□□□ -0.46
CXCL1P09341 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.15□□□□□ -0.46
CXCL1P09341 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.15□□□□□ -0.46
CXCL1P09341 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.15□□□□□ -0.46
CXCL1P09341 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CXCL1P09341 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CXCL1P09341 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CXCL1P09341 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CXCL1P09341 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
CXCL1P09341 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CXCL1P09341 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CXCL1P09341 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CXCL1P09341 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CXCL1P09341 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.14□□□□□ -0.47
CXCL1P09341 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
CXCL1P09341 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CXCL1P09341 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CXCL1P09341 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.14□□□□□ -0.47
CXCL1P09341 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CXCL1P09341 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.14□□□□□ -0.47
CXCL1P09341 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CXCL1P09341 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CXCL1P09341 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CXCL1P09341 RCN1P1-201ENST00000400413 996 ntBASIC12.14□□□□□ -0.47
CXCL1P09341 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CXCL1P09341 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.14□□□□□ -0.47
CXCL1P09341 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.14□□□□□ -0.47
CXCL1P09341 DUX4L26-201ENST00000489078 1255 ntBASIC12.14□□□□□ -0.47
CXCL1P09341 AC087641.1-201ENST00000557561 1021 ntBASIC12.14□□□□□ -0.47
CXCL1P09341 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.14□□□□□ -0.47
CXCL1P09341 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.14□□□□□ -0.47
CXCL1P09341 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.14□□□□□ -0.47
CXCL1P09341 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.14□□□□□ -0.47
CXCL1P09341 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms