Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.74■□□□□ 0.59
APPP05067 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APPP05067 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
APPP05067 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APPP05067 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
APPP05067 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.74■□□□□ 0.59
APPP05067 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APPP05067 AL121723.1-201ENST00000445194 1519 ntBASIC18.74■□□□□ 0.59
APPP05067 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APPP05067 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
APPP05067 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.73■□□□□ 0.59
APPP05067 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.73■□□□□ 0.59
APPP05067 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
APPP05067 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
APPP05067 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.73■□□□□ 0.59
APPP05067 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
APPP05067 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.73■□□□□ 0.59
APPP05067 AC093726.1-201ENST00000608064 963 ntBASIC18.73■□□□□ 0.59
APPP05067 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.73■□□□□ 0.59
APPP05067 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.73■□□□□ 0.59
APPP05067 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.73■□□□□ 0.59
APPP05067 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APPP05067 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.73■□□□□ 0.59
APPP05067 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.73■□□□□ 0.59
APPP05067 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
APPP05067 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.72■□□□□ 0.59
APPP05067 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.72■□□□□ 0.59
APPP05067 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.72■□□□□ 0.59
APPP05067 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
APPP05067 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.72■□□□□ 0.59
APPP05067 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.72■□□□□ 0.59
APPP05067 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.72■□□□□ 0.59
APPP05067 KRT18P43-201ENST00000469825 1281 ntBASIC18.72■□□□□ 0.59
APPP05067 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.72■□□□□ 0.59
APPP05067 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.72■□□□□ 0.59
APPP05067 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.72■□□□□ 0.59
APPP05067 AC099568.2-201ENST00000609194 695 ntBASIC18.72■□□□□ 0.59
APPP05067 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.72■□□□□ 0.59
APPP05067 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 AC025048.6-201ENST00000634326 1161 ntBASIC18.72■□□□□ 0.59
APPP05067 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.72■□□□□ 0.59
APPP05067 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
APPP05067 AC126755.1-201ENST00000525846 6405 ntBASIC18.72■□□□□ 0.59
APPP05067 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
APPP05067 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.72■□□□□ 0.59
APPP05067 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.72■□□□□ 0.59
APPP05067 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APPP05067 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.71■□□□□ 0.59
APPP05067 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
APPP05067 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APPP05067 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
APPP05067 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
APPP05067 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms