Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV3P03979 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TRGV3P03979 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.32□□□□□ -0.44
TRGV3P03979 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV3P03979 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 AC009477.1-201ENST00000452936 217 ntBASIC12.32□□□□□ -0.44
TRGV3P03979 SLED1-202ENST00000512051 380 ntBASIC12.32□□□□□ -0.44
TRGV3P03979 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV3P03979 ZNF890P-202ENST00000530367 1156 ntBASIC12.32□□□□□ -0.44
TRGV3P03979 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TRGV3P03979 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.32□□□□□ -0.44
TRGV3P03979 AC092384.3-202ENST00000564646 2873 ntBASIC12.32□□□□□ -0.44
TRGV3P03979 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.32□□□□□ -0.44
TRGV3P03979 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 Z97205.2-201ENST00000564697 1639 ntBASIC12.32□□□□□ -0.44
TRGV3P03979 BTBD7P1-201ENST00000447253 1453 ntBASIC12.32□□□□□ -0.44
TRGV3P03979 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TRGV3P03979 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TRGV3P03979 AC092127.1-201ENST00000567093 3455 ntBASIC12.32□□□□□ -0.44
TRGV3P03979 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.32□□□□□ -0.44
TRGV3P03979 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV3P03979 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRGV3P03979 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV3P03979 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.31□□□□□ -0.44
TRGV3P03979 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.31□□□□□ -0.44
TRGV3P03979 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRGV3P03979 AC092850.2-201ENST00000623821 2697 ntBASIC12.31□□□□□ -0.44
TRGV3P03979 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.31□□□□□ -0.44
TRGV3P03979 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TRGV3P03979 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRGV3P03979 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.31□□□□□ -0.44
TRGV3P03979 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 FAM8A3P-201ENST00000427218 844 ntBASIC12.31□□□□□ -0.44
TRGV3P03979 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.31□□□□□ -0.44
TRGV3P03979 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.31□□□□□ -0.44
TRGV3P03979 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.31□□□□□ -0.44
TRGV3P03979 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV3P03979 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.31□□□□□ -0.44
TRGV3P03979 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.31□□□□□ -0.44
TRGV3P03979 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.31□□□□□ -0.44
TRGV3P03979 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.31□□□□□ -0.44
TRGV3P03979 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.31□□□□□ -0.44
TRGV3P03979 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TRGV3P03979 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRGV3P03979 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV3P03979 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms