Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
MT-ND1P03886 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.8□□□□□ -0.04
MT-ND1P03886 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.8□□□□□ -0.04
MT-ND1P03886 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 AC034105.1-201ENST00000563488 319 ntBASIC14.8□□□□□ -0.04
MT-ND1P03886 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.8□□□□□ -0.04
MT-ND1P03886 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 AC064836.3-201ENST00000607928 673 ntBASIC14.8□□□□□ -0.04
MT-ND1P03886 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.8□□□□□ -0.04
MT-ND1P03886 BCAR1-209ENST00000546196 1340 ntBASIC14.8□□□□□ -0.04
MT-ND1P03886 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 AC104109.2-201ENST00000602919 1418 ntBASIC14.8□□□□□ -0.04
MT-ND1P03886 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-ND1P03886 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-ND1P03886 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.79□□□□□ -0.04
MT-ND1P03886 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-ND1P03886 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 GRK6P1-201ENST00000400595 1711 ntBASIC14.79□□□□□ -0.04
MT-ND1P03886 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
MT-ND1P03886 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 PRYP6-201ENST00000514804 343 ntBASIC14.79□□□□□ -0.04
MT-ND1P03886 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.79□□□□□ -0.04
MT-ND1P03886 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MT-ND1P03886 KRT19P2-202ENST00000557173 1012 ntBASIC14.79□□□□□ -0.04
MT-ND1P03886 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.79□□□□□ -0.04
MT-ND1P03886 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.79□□□□□ -0.04
MT-ND1P03886 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.79□□□□□ -0.04
MT-ND1P03886 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.79□□□□□ -0.04
MT-ND1P03886 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-ND1P03886 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-ND1P03886 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-ND1P03886 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-ND1P03886 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MT-ND1P03886 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-ND1P03886 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms