Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.71■□□□□ 0.11
VAPBO95292 AL136317.3-201ENST00000618497 906 ntBASIC15.71■□□□□ 0.11
VAPBO95292 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VAPBO95292 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.71■□□□□ 0.11
VAPBO95292 FO538757.1-201ENST00000623083 1397 ntBASIC15.71■□□□□ 0.11
VAPBO95292 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VAPBO95292 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VAPBO95292 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VAPBO95292 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VAPBO95292 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
VAPBO95292 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VAPBO95292 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VAPBO95292 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
VAPBO95292 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
VAPBO95292 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VAPBO95292 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 HLA-V-204ENST00000476601 1289 ntBASIC15.7■□□□□ 0.1
VAPBO95292 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.7■□□□□ 0.1
VAPBO95292 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 AC025678.2-201ENST00000562061 970 ntBASIC15.7■□□□□ 0.1
VAPBO95292 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.7■□□□□ 0.1
VAPBO95292 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 SPDYE12P-201ENST00000618416 771 ntBASIC15.7■□□□□ 0.1
VAPBO95292 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.7■□□□□ 0.1
VAPBO95292 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.7■□□□□ 0.1
VAPBO95292 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VAPBO95292 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VAPBO95292 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VAPBO95292 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VAPBO95292 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPBO95292 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.69■□□□□ 0.1
VAPBO95292 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPBO95292 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms