Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 AC006557.2-201ENST00000592985 1240 ntBASIC11.47□□□□□ -0.57
SMKR1H3BMG3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SMKR1H3BMG3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AL589702.1-201ENST00000641229 1509 ntBASIC11.46□□□□□ -0.57
SMKR1H3BMG3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.46□□□□□ -0.57
SMKR1H3BMG3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AC211429.1-201ENST00000415277 523 ntBASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 GPX1P2-201ENST00000429271 606 ntBASIC11.46□□□□□ -0.57
SMKR1H3BMG3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 AC092119.3-201ENST00000612618 583 ntBASIC11.46□□□□□ -0.57
SMKR1H3BMG3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.46□□□□□ -0.57
SMKR1H3BMG3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.58
SMKR1H3BMG3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms