Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV3S1A0A5B6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 MYO15B-237ENST00000642007 4893 ntBASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AC105233.2-201ENST00000523697 349 ntBASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AF228730.5-201ENST00000530288 346 ntBASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AL161645.1-201ENST00000622716 1255 ntBASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AC138969.3-201ENST00000546612 1459 ntBASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AC138932.2-201ENST00000548268 1459 ntBASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AC126755.4-201ENST00000549796 1459 ntBASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 MST1P2-201ENST00000457982 2291 ntBASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV3S1A0A5B6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 AC023141.13-201ENST00000604991 943 ntBASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 AC093458.2-201ENST00000623150 629 ntBASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms