Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC196A0A1B0GTZ2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC196A0A1B0GTZ2 AC013268.4-201ENST00000637413 2228 ntBASIC18.14■□□□□ 0.49
CCDC196A0A1B0GTZ2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC196A0A1B0GTZ2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC196A0A1B0GTZ2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC196A0A1B0GTZ2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 AL109954.1-202ENST00000564051 2148 ntBASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 SPDYE19P-201ENST00000338590 713 ntBASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC196A0A1B0GTZ2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 AC025181.2-201ENST00000606994 802 ntBASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC196A0A1B0GTZ2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC196A0A1B0GTZ2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC196A0A1B0GTZ2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC196A0A1B0GTZ2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms