Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 MRPL20P1-201ENST00000400819 433 ntBASIC14.81□□□□□ -0.04
AP4S1Q9Y587 PCED1CP-201ENST00000419887 785 ntBASIC14.81□□□□□ -0.04
AP4S1Q9Y587 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 AL078644.1-201ENST00000609881 752 ntBASIC14.81□□□□□ -0.04
AP4S1Q9Y587 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 PMS2P7-201ENST00000506558 1336 ntBASIC14.81□□□□□ -0.04
AP4S1Q9Y587 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 MTHFR-210ENST00000641407 2387 ntBASIC14.81□□□□□ -0.04
AP4S1Q9Y587 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 OR7E47P-204ENST00000575924 449 ntBASIC14.8□□□□□ -0.04
AP4S1Q9Y587 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 NPAP1P7-201ENST00000613027 823 ntBASIC14.8□□□□□ -0.04
AP4S1Q9Y587 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.8□□□□□ -0.04
AP4S1Q9Y587 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms