Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 REXO1L1P-202ENST00000608646 1974 ntBASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 AL645939.2-201ENST00000427340 991 ntBASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 FAM86GP-201ENST00000448322 971 ntBASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 PHKG1P2-201ENST00000457537 863 ntBASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 HLA-V-204ENST00000476601 1289 ntBASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 AC093028.1-201ENST00000622998 982 ntBASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAPPC4Q9Y296 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AC107890.1-201ENST00000422478 521 ntBASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AC092183.1-201ENST00000469884 875 ntBASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AC125807.1-201ENST00000483097 614 ntBASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AC069120.2-201ENST00000524091 540 ntBASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AL450472.2-201ENST00000603663 1156 ntBASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 AC005840.4-201ENST00000541242 2494 ntBASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAPPC4Q9Y296 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAPPC4Q9Y296 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAPPC4Q9Y296 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAPPC4Q9Y296 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAPPC4Q9Y296 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAPPC4Q9Y296 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms