Protein–RNA interactions for Protein: Q9UPA5

BSN, Protein bassoon, humanhuman

Predictions only

Length 3,926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSNQ9UPA5 AL157791.1-201ENST00000553667 1699 ntBASIC13.69□□□□□ -0.22
BSNQ9UPA5 SCARNA21-201ENST00000517026 139 ntBASIC13.69□□□□□ -0.22
BSNQ9UPA5 RBM8B-201ENST00000555532 525 ntBASIC13.69□□□□□ -0.22
BSNQ9UPA5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 RPS9P1-201ENST00000419943 583 ntBASIC13.69□□□□□ -0.22
BSNQ9UPA5 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.69□□□□□ -0.22
BSNQ9UPA5 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 VDAC1P1-201ENST00000439229 848 ntBASIC13.69□□□□□ -0.22
BSNQ9UPA5 AC021723.1-201ENST00000486306 515 ntBASIC13.69□□□□□ -0.22
BSNQ9UPA5 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BSNQ9UPA5 AC084364.1-201ENST00000551967 1556 ntBASIC13.68□□□□□ -0.22
BSNQ9UPA5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 CICP11-201ENST00000434745 2827 ntBASIC13.68□□□□□ -0.22
BSNQ9UPA5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 AC106794.1-201ENST00000506935 792 ntBASIC13.68□□□□□ -0.22
BSNQ9UPA5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 AL157813.1-201ENST00000612996 587 ntBASIC13.68□□□□□ -0.22
BSNQ9UPA5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 LINC01165-201ENST00000445190 1623 ntBASIC13.68□□□□□ -0.22
BSNQ9UPA5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 AL031713.1-201ENST00000564813 661 ntBASIC13.68□□□□□ -0.22
BSNQ9UPA5 AC138466.3-201ENST00000619983 221 ntBASIC13.68□□□□□ -0.22
BSNQ9UPA5 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BSNQ9UPA5 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.68□□□□□ -0.22
BSNQ9UPA5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BSNQ9UPA5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 RN7SKP175-201ENST00000408472 289 ntBASIC13.67□□□□□ -0.22
BSNQ9UPA5 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BSNQ9UPA5 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BSNQ9UPA5 AP003680.1-201ENST00000598970 3660 ntBASIC13.67□□□□□ -0.22
BSNQ9UPA5 IL9RP3-201ENST00000442856 1674 ntBASIC13.67□□□□□ -0.22
BSNQ9UPA5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BSNQ9UPA5 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BSNQ9UPA5 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
BSNQ9UPA5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BSNQ9UPA5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BSNQ9UPA5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BSNQ9UPA5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BSNQ9UPA5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms