Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 AC010460.3-201ENST00000511359 1579 ntBASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 AC091304.2-201ENST00000564639 760 ntBASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 BNIP3P18-201ENST00000593976 575 ntBASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 AL121772.3-201ENST00000610840 674 ntBASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 AC011474.4-201ENST00000623523 2076 ntBASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UBQLN2Q9UHD9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 AL031595.1-201ENST00000623969 4709 ntBASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.27□□□□□ -0.28
UBQLN2Q9UHD9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 NUS1P1-201ENST00000446295 882 ntBASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 AL353801.3-201ENST00000609898 542 ntBASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBQLN2Q9UHD9 AC125634.1-201ENST00000438758 1403 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms