Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 TIMM8BP1-201ENST00000452384 211 ntBASIC14.79□□□□□ -0.04
VAPAQ9P0L0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
VAPAQ9P0L0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 FAM8A3P-201ENST00000427218 844 ntBASIC14.78□□□□□ -0.04
VAPAQ9P0L0 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 BANF1P1-201ENST00000553684 263 ntBASIC14.78□□□□□ -0.04
VAPAQ9P0L0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VAPAQ9P0L0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
VAPAQ9P0L0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 HIST3H2BA-201ENST00000436555 524 ntBASIC14.77□□□□□ -0.05
VAPAQ9P0L0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 AC120114.3-201ENST00000611923 658 ntBASIC14.77□□□□□ -0.05
VAPAQ9P0L0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
VAPAQ9P0L0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms