Protein–RNA interactions for Protein: Q9BZW5

TM6SF1, Transmembrane 6 superfamily member 1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1Q9BZW5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM6SF1Q9BZW5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TM6SF1Q9BZW5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM6SF1Q9BZW5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM6SF1Q9BZW5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM6SF1Q9BZW5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM6SF1Q9BZW5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM6SF1Q9BZW5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 AC009407.1-201ENST00000568958 598 ntBASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 AL390755.1-201ENST00000623716 2027 ntBASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM6SF1Q9BZW5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 REXO1L4P-201ENST00000605109 1937 ntBASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 AC241585.1-201ENST00000433527 519 ntBASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 LINC02228-204ENST00000642115 2962 ntBASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM6SF1Q9BZW5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.34■□□□□ 0.53
TM6SF1Q9BZW5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms