Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AC020658.6-201ENST00000623564 1870 ntBASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AC011700.1-201ENST00000610409 2627 ntBASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 KRT18P27-201ENST00000427733 1299 ntBASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 DNAJB3-201ENST00000446806 729 ntBASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 AC139530.3-201ENST00000620344 690 ntBASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 AC016027.1-202ENST00000607927 1699 ntBASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 AC067750.1-201ENST00000608826 6545 ntBASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.19□□□□□ -0.46
NDUFAF3Q9BU61 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 TOP3BP1-201ENST00000420768 1380 ntBASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 NUTM2HP-201ENST00000442076 2498 ntBASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 AC148477.4-201ENST00000613430 1793 ntBASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NDUFAF3Q9BU61 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms