Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 UXT-AS1-201ENST00000590504 1525 ntBASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 AL109954.1-202ENST00000564051 2148 ntBASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 AP001282.1-201ENST00000531301 1499 ntBASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 AL592309.1-201ENST00000443127 649 ntBASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 DNAJB3-201ENST00000446806 729 ntBASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 AC069335.1-201ENST00000489972 472 ntBASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 KRT8P23-201ENST00000560090 1207 ntBASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 AL731571.1-201ENST00000617058 5428 ntBASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHRDL1Q9BU40 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms