Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.46□□□□□ -0.57
MUC4Q99102 TSPY16P-201ENST00000449843 468 ntBASIC11.46□□□□□ -0.57
MUC4Q99102 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
MUC4Q99102 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.46□□□□□ -0.57
MUC4Q99102 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.46□□□□□ -0.57
MUC4Q99102 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
MUC4Q99102 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC11.46□□□□□ -0.57
MUC4Q99102 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
MUC4Q99102 AL009178.2-201ENST00000597278 2719 ntBASIC11.46□□□□□ -0.57
MUC4Q99102 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.46□□□□□ -0.58
MUC4Q99102 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
MUC4Q99102 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.46□□□□□ -0.58
MUC4Q99102 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.46□□□□□ -0.58
MUC4Q99102 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
MUC4Q99102 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.46□□□□□ -0.58
MUC4Q99102 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
MUC4Q99102 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.45□□□□□ -0.58
MUC4Q99102 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.45□□□□□ -0.58
MUC4Q99102 AC009093.7-201ENST00000623853 1223 ntBASIC11.45□□□□□ -0.58
MUC4Q99102 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.45□□□□□ -0.58
MUC4Q99102 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
MUC4Q99102 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.45□□□□□ -0.58
MUC4Q99102 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 AL161772.1-201ENST00000610494 4412 ntBASIC11.45□□□□□ -0.58
MUC4Q99102 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.45□□□□□ -0.58
MUC4Q99102 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
MUC4Q99102 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
MUC4Q99102 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 CRB3P1-201ENST00000449338 276 ntBASIC11.45□□□□□ -0.58
MUC4Q99102 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 AC109322.1-201ENST00000524499 1264 ntBASIC11.45□□□□□ -0.58
MUC4Q99102 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.45□□□□□ -0.58
MUC4Q99102 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.45□□□□□ -0.58
MUC4Q99102 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MUC4Q99102 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.45□□□□□ -0.58
MUC4Q99102 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.45□□□□□ -0.58
MUC4Q99102 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.45□□□□□ -0.58
MUC4Q99102 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
MUC4Q99102 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.44□□□□□ -0.58
MUC4Q99102 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
MUC4Q99102 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
MUC4Q99102 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.44□□□□□ -0.58
MUC4Q99102 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
MUC4Q99102 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
MUC4Q99102 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
MUC4Q99102 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
MUC4Q99102 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
MUC4Q99102 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
MUC4Q99102 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
MUC4Q99102 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms