Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 CES1P1-201ENST00000421606 1704 ntBASIC14.76□□□□□ -0.05
NR1H4Q96RI1 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 AL020989.1-201ENST00000422979 469 ntBASIC14.76□□□□□ -0.05
NR1H4Q96RI1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 KRT18P21-201ENST00000515767 1272 ntBASIC14.76□□□□□ -0.05
NR1H4Q96RI1 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 AC005336.2-201ENST00000593183 939 ntBASIC14.75□□□□□ -0.05
NR1H4Q96RI1 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H4Q96RI1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NR1H4Q96RI1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms