Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 RPS9P1-201ENST00000419943 583 ntBASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 AC136759.1-202ENST00000530858 2194 ntBASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 AL359258.3-201ENST00000622910 2331 ntBASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.03□□□□□ -0.32
CSMD1Q96PZ7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 AC124947.2-201ENST00000547118 1133 ntBASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 RBM8B-201ENST00000555532 525 ntBASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 AC006449.5-201ENST00000610658 2098 ntBASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 AL691432.1-201ENST00000596308 1422 ntBASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 FAM86KP-201ENST00000509817 987 ntBASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 MIR6858-201ENST00000620733 67 ntBASIC13.02□□□□□ -0.32
CSMD1Q96PZ7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 AL138799.1-201ENST00000448213 1675 ntBASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 AC009093.2-202ENST00000620513 2079 ntBASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 RNU1-114P-201ENST00000365297 166 ntBASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
CSMD1Q96PZ7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms