Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 HILS1-202ENST00000545329 423 ntBASIC14.8□□□□□ -0.04
TM9SF4Q92544 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.8□□□□□ -0.04
TM9SF4Q92544 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TM9SF4Q92544 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 SPDYE18-201ENST00000510091 1050 ntBASIC14.79□□□□□ -0.04
TM9SF4Q92544 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 KRT17P8-201ENST00000540749 863 ntBASIC14.79□□□□□ -0.04
TM9SF4Q92544 WASH4P-201ENST00000564273 1246 ntBASIC14.79□□□□□ -0.04
TM9SF4Q92544 AC069224.1-201ENST00000566372 1715 ntBASIC14.79□□□□□ -0.04
TM9SF4Q92544 AC092337.1-201ENST00000568699 1129 ntBASIC14.79□□□□□ -0.04
TM9SF4Q92544 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 AC132938.2-201ENST00000579188 680 ntBASIC14.79□□□□□ -0.04
TM9SF4Q92544 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 MIR4321-201ENST00000592276 80 ntBASIC14.79□□□□□ -0.04
TM9SF4Q92544 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 AL591163.1-201ENST00000641757 987 ntBASIC14.79□□□□□ -0.04
TM9SF4Q92544 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TM9SF4Q92544 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.79□□□□□ -0.04
TM9SF4Q92544 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF4Q92544 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 AC234783.1-201ENST00000441761 496 ntBASIC14.78□□□□□ -0.04
TM9SF4Q92544 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.78□□□□□ -0.04
TM9SF4Q92544 AC007389.4-201ENST00000454674 793 ntBASIC14.78□□□□□ -0.04
TM9SF4Q92544 ACA64.2-201ENST00000459014 129 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms