Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC106730.1-201ENST00000566722 1090 ntBASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 UXT-AS1-201ENST00000590504 1525 ntBASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC44A1Q8WWI5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 MIR574-201ENST00000385209 96 ntBASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 FO393414.2-201ENST00000405153 598 ntBASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 TIMM8BP1-201ENST00000452384 211 ntBASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 BANF1P1-201ENST00000553684 263 ntBASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC44A1Q8WWI5 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 AP000845.1-201ENST00000581677 2131 ntBASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 SPDYE17-201ENST00000412399 783 ntBASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 AC023274.1-201ENST00000418278 595 ntBASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms