Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 DNAJB3-202ENST00000449667 1266 ntBASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 SERBP1P3-201ENST00000459980 809 ntBASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 AC027612.4-201ENST00000605371 583 ntBASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 AC067750.1-201ENST00000608826 6545 ntBASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAF3IP1Q8TDR0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 AC069262.1-201ENST00000539058 672 ntBASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 AL512356.2-201ENST00000546955 174 ntBASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 MIR6069-201ENST00000620069 79 ntBASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP1Q8TDR0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 AC112693.3-201ENST00000624819 1983 ntBASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms