Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 MIR4313-201ENST00000580760 101 ntBASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 AC012569.1-201ENST00000591191 1524 ntBASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.2□□□□□ -0.78
SMIM11BQ8TCY0 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 MTHFR-210ENST00000641407 2387 ntBASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 ACE3P-201ENST00000423435 1973 ntBASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 AC113367.3-201ENST00000508316 1912 ntBASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 AL137013.1-201ENST00000432946 1228 ntBASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 KRT17P6-201ENST00000453795 1220 ntBASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 MTRF1LP2-201ENST00000506027 1122 ntBASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 MIR4321-201ENST00000592276 80 ntBASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 AC091076.1-201ENST00000610741 619 ntBASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 AL731571.1-201ENST00000617058 5428 ntBASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SMIM11BQ8TCY0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMIM11BQ8TCY0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms