Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC022616.1-201ENST00000518688 554 ntBASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 RN7SL713P-201ENST00000582127 302 ntBASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 PPY2P-201ENST00000582808 702 ntBASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 AL603764.1-201ENST00000636452 321 ntBASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS4Q8IUM7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 POM121L8P-201ENST00000417732 1281 ntBASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 POM121L9P-203ENST00000441984 1285 ntBASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 SAMD11P1-201ENST00000571429 661 ntBASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 ZACNP1-201ENST00000612259 710 ntBASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 AC112504.1-201ENST00000623415 1841 ntBASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPAS4Q8IUM7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 AL662890.1-201ENST00000396818 632 ntBASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 OR10B1P-201ENST00000601666 907 ntBASIC16.53■□□□□ 0.24
NPAS4Q8IUM7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms