Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AC079140.1-201ENST00000508039 487 ntBASIC14.1□□□□□ -0.15
CDK5Q00535 KRT8P48-201ENST00000515599 1220 ntBASIC14.1□□□□□ -0.15
CDK5Q00535 RNA5SP416-201ENST00000516838 111 ntBASIC14.1□□□□□ -0.15
CDK5Q00535 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.1□□□□□ -0.15
CDK5Q00535 SPDYE9P-201ENST00000570642 692 ntBASIC14.1□□□□□ -0.15
CDK5Q00535 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.1□□□□□ -0.15
CDK5Q00535 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 SPDYE10P-202ENST00000612005 668 ntBASIC14.1□□□□□ -0.15
CDK5Q00535 SPDYE8P-202ENST00000612377 668 ntBASIC14.1□□□□□ -0.15
CDK5Q00535 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.1□□□□□ -0.15
CDK5Q00535 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.1□□□□□ -0.15
CDK5Q00535 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.1□□□□□ -0.15
CDK5Q00535 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.1□□□□□ -0.15
CDK5Q00535 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.1□□□□□ -0.15
CDK5Q00535 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CDK5Q00535 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK5Q00535 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.1□□□□□ -0.15
CDK5Q00535 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.09□□□□□ -0.15
CDK5Q00535 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.09□□□□□ -0.15
CDK5Q00535 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.09□□□□□ -0.15
CDK5Q00535 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDK5Q00535 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDK5Q00535 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.09□□□□□ -0.15
CDK5Q00535 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDK5Q00535 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.09□□□□□ -0.15
CDK5Q00535 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 FO393414.2-201ENST00000405153 598 ntBASIC14.09□□□□□ -0.15
CDK5Q00535 FAM58CP-201ENST00000435741 640 ntBASIC14.09□□□□□ -0.15
CDK5Q00535 HIST3H2BA-201ENST00000436555 524 ntBASIC14.09□□□□□ -0.15
CDK5Q00535 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.09□□□□□ -0.15
CDK5Q00535 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.09□□□□□ -0.15
CDK5Q00535 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CDK5Q00535 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDK5Q00535 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDK5Q00535 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.09□□□□□ -0.15
CDK5Q00535 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDK5Q00535 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.08□□□□□ -0.15
CDK5Q00535 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.08□□□□□ -0.15
CDK5Q00535 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDK5Q00535 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDK5Q00535 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDK5Q00535 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.08□□□□□ -0.15
CDK5Q00535 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
CDK5Q00535 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDK5Q00535 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDK5Q00535 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDK5Q00535 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDK5Q00535 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDK5Q00535 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDK5Q00535 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms