Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.8□□□□□ -0.04
GABREP78334 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GABREP78334 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.8□□□□□ -0.04
GABREP78334 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 FNTAP2-201ENST00000430308 634 ntBASIC14.8□□□□□ -0.04
GABREP78334 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 AC079328.1-201ENST00000560358 952 ntBASIC14.8□□□□□ -0.04
GABREP78334 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.8□□□□□ -0.04
GABREP78334 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 EEF1DP1-201ENST00000585891 896 ntBASIC14.8□□□□□ -0.04
GABREP78334 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.8□□□□□ -0.04
GABREP78334 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.8□□□□□ -0.04
GABREP78334 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.8□□□□□ -0.04
GABREP78334 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.8□□□□□ -0.04
GABREP78334 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
GABREP78334 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GABREP78334 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABREP78334 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.8□□□□□ -0.04
GABREP78334 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.79□□□□□ -0.04
GABREP78334 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.79□□□□□ -0.04
GABREP78334 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.79□□□□□ -0.04
GABREP78334 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.79□□□□□ -0.04
GABREP78334 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.79□□□□□ -0.04
GABREP78334 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 AC005077.2-201ENST00000449786 690 ntBASIC14.79□□□□□ -0.04
GABREP78334 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.79□□□□□ -0.04
GABREP78334 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.79□□□□□ -0.04
GABREP78334 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 RNA5SP486-201ENST00000515961 83 ntBASIC14.79□□□□□ -0.04
GABREP78334 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.79□□□□□ -0.04
GABREP78334 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.79□□□□□ -0.04
GABREP78334 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GABREP78334 AC132938.4-201ENST00000623835 848 ntBASIC14.79□□□□□ -0.04
GABREP78334 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.79□□□□□ -0.04
GABREP78334 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms