Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLDN12P56749 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN12P56749 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN12P56749 CRYGEP-201ENST00000412192 528 ntBASIC13.65□□□□□ -0.22
CLDN12P56749 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 AL645939.2-201ENST00000427340 991 ntBASIC13.65□□□□□ -0.22
CLDN12P56749 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN12P56749 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN12P56749 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 AF186996.4-201ENST00000467186 377 ntBASIC13.65□□□□□ -0.22
CLDN12P56749 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN12P56749 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLDN12P56749 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
CLDN12P56749 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLDN12P56749 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 AC041040.2-201ENST00000622926 2899 ntBASIC13.64□□□□□ -0.23
CLDN12P56749 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CLDN12P56749 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
CLDN12P56749 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 RPS2P28-201ENST00000314255 741 ntBASIC13.64□□□□□ -0.23
CLDN12P56749 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.64□□□□□ -0.23
CLDN12P56749 KRT18P67-201ENST00000432816 1264 ntBASIC13.64□□□□□ -0.23
CLDN12P56749 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 AC140658.5-201ENST00000438532 169 ntBASIC13.64□□□□□ -0.23
CLDN12P56749 HCG4B-203ENST00000450128 991 ntBASIC13.64□□□□□ -0.23
CLDN12P56749 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.64□□□□□ -0.23
CLDN12P56749 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.64□□□□□ -0.23
CLDN12P56749 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.64□□□□□ -0.23
CLDN12P56749 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDN12P56749 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDN12P56749 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 FAM215A-202ENST00000632077 792 ntBASIC13.64□□□□□ -0.23
CLDN12P56749 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CLDN12P56749 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CLDN12P56749 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CLDN12P56749 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDN12P56749 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN12P56749 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CLDN12P56749 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN12P56749 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN12P56749 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms