Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 FAM8A4P-201ENST00000435433 1213 ntBASIC17.84■□□□□ 0.45
HMGCS2P54868 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS2P54868 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.84■□□□□ 0.45
HMGCS2P54868 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
HMGCS2P54868 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCS2P54868 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.84■□□□□ 0.45
HMGCS2P54868 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HMGCS2P54868 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.84■□□□□ 0.45
HMGCS2P54868 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS2P54868 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCS2P54868 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.84■□□□□ 0.45
HMGCS2P54868 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCS2P54868 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.84■□□□□ 0.45
HMGCS2P54868 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HMGCS2P54868 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCS2P54868 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.84■□□□□ 0.45
HMGCS2P54868 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.83■□□□□ 0.45
HMGCS2P54868 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HMGCS2P54868 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HMGCS2P54868 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS2P54868 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS2P54868 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.83■□□□□ 0.45
HMGCS2P54868 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.83■□□□□ 0.45
HMGCS2P54868 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HMGCS2P54868 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS2P54868 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS2P54868 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.83■□□□□ 0.45
HMGCS2P54868 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS2P54868 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS2P54868 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS2P54868 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.83■□□□□ 0.44
HMGCS2P54868 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
HMGCS2P54868 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
HMGCS2P54868 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS2P54868 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
HMGCS2P54868 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HMGCS2P54868 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.83■□□□□ 0.44
HMGCS2P54868 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS2P54868 EIF3FP3-201ENST00000434851 1086 ntBASIC17.83■□□□□ 0.44
HMGCS2P54868 POM121L10P-201ENST00000436994 1285 ntBASIC17.83■□□□□ 0.44
HMGCS2P54868 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCS2P54868 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS2P54868 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCS2P54868 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCS2P54868 COX5BP1-201ENST00000507622 393 ntBASIC17.83■□□□□ 0.44
HMGCS2P54868 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCS2P54868 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.83■□□□□ 0.44
HMGCS2P54868 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.83■□□□□ 0.44
HMGCS2P54868 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS2P54868 AL451050.2-201ENST00000606967 682 ntBASIC17.83■□□□□ 0.44
HMGCS2P54868 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.83■□□□□ 0.44
HMGCS2P54868 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS2P54868 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS2P54868 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HMGCS2P54868 AC084364.1-201ENST00000551967 1556 ntBASIC17.83■□□□□ 0.44
HMGCS2P54868 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS2P54868 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HMGCS2P54868 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.82■□□□□ 0.44
HMGCS2P54868 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS2P54868 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HMGCS2P54868 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS2P54868 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMGCS2P54868 AL645937.2-201ENST00000396808 931 ntBASIC17.82■□□□□ 0.44
HMGCS2P54868 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS2P54868 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS2P54868 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS2P54868 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS2P54868 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
HMGCS2P54868 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS2P54868 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.82■□□□□ 0.44
HMGCS2P54868 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.82■□□□□ 0.44
HMGCS2P54868 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
HMGCS2P54868 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.82■□□□□ 0.44
HMGCS2P54868 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.82■□□□□ 0.44
HMGCS2P54868 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS2P54868 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms