Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5CP51148 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5CP51148 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5CP51148 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
RAB5CP51148 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5CP51148 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.62□□□□□ -0.39
RAB5CP51148 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.62□□□□□ -0.39
RAB5CP51148 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.62□□□□□ -0.39
RAB5CP51148 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.62□□□□□ -0.39
RAB5CP51148 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5CP51148 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5CP51148 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
RAB5CP51148 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 AC079776.2-201ENST00000641154 1609 ntBASIC12.62□□□□□ -0.39
RAB5CP51148 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB5CP51148 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RAB5CP51148 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 AC011474.4-201ENST00000623523 2076 ntBASIC12.61□□□□□ -0.39
RAB5CP51148 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.61□□□□□ -0.39
RAB5CP51148 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 TSPY7P-201ENST00000431358 1114 ntBASIC12.61□□□□□ -0.39
RAB5CP51148 PRYP5-201ENST00000451909 266 ntBASIC12.61□□□□□ -0.39
RAB5CP51148 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB5CP51148 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.61□□□□□ -0.39
RAB5CP51148 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB5CP51148 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB5CP51148 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB5CP51148 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RAB5CP51148 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 KRT17P2-201ENST00000300992 1314 ntBASIC12.61□□□□□ -0.39
RAB5CP51148 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB5CP51148 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB5CP51148 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RAB5CP51148 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB5CP51148 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms