Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PCP4P48539 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PCP4P48539 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
PCP4P48539 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC10.35□□□□□ -0.75
PCP4P48539 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC10.35□□□□□ -0.75
PCP4P48539 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC10.35□□□□□ -0.75
PCP4P48539 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
PCP4P48539 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC10.35□□□□□ -0.75
PCP4P48539 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
PCP4P48539 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.35□□□□□ -0.75
PCP4P48539 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC10.35□□□□□ -0.75
PCP4P48539 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 FAM78A-202ENST00000372269 3659 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.35□□□□□ -0.75
PCP4P48539 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
PCP4P48539 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC10.35□□□□□ -0.75
PCP4P48539 COPS8-201ENST00000354371 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 TMC2-201ENST00000358864 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
PCP4P48539 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.35□□□□□ -0.75
PCP4P48539 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 AC002310.6-201ENST00000624451 1377 ntBASIC10.35□□□□□ -0.75
PCP4P48539 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 CACNG4-201ENST00000262138 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
PCP4P48539 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC10.35□□□□□ -0.75
PCP4P48539 AC011481.3-201ENST00000623895 5594 ntBASIC10.35□□□□□ -0.75
PCP4P48539 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
PCP4P48539 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC10.35□□□□□ -0.75
PCP4P48539 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PCP4P48539 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC10.35□□□□□ -0.75
PCP4P48539 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
PCP4P48539 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
PCP4P48539 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 ARMC1-201ENST00000276569 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.34□□□□□ -0.75
PCP4P48539 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
PCP4P48539 AIPL1-203ENST00000381129 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
PCP4P48539 METTL16-201ENST00000263092 5711 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 KRT18P10-201ENST00000388836 1287 ntBASIC10.34□□□□□ -0.75
PCP4P48539 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC10.34□□□□□ -0.75
PCP4P48539 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
PCP4P48539 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 UNC45B-203ENST00000591048 2553 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
PCP4P48539 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 NDST1-207ENST00000523767 3449 ntTSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 SLC14A2-201ENST00000255226 4746 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 SLC4A1AP-201ENST00000326019 2959 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 SLC4A11-201ENST00000380056 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC10.34□□□□□ -0.75
PCP4P48539 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10.34□□□□□ -0.75
PCP4P48539 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms