Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC084121.3-201ENST00000641716 218 ntBASIC16.5■□□□□ 0.23
RFC1P35251 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.5■□□□□ 0.23
RFC1P35251 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
RFC1P35251 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.5■□□□□ 0.23
RFC1P35251 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.5■□□□□ 0.23
RFC1P35251 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RFC1P35251 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC1P35251 AC103702.1-201ENST00000548801 2630 ntBASIC16.49■□□□□ 0.23
RFC1P35251 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
RFC1P35251 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RFC1P35251 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.49■□□□□ 0.23
RFC1P35251 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.49■□□□□ 0.23
RFC1P35251 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RFC1P35251 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RFC1P35251 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.49■□□□□ 0.23
RFC1P35251 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.49■□□□□ 0.23
RFC1P35251 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.49■□□□□ 0.23
RFC1P35251 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.49■□□□□ 0.23
RFC1P35251 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.49■□□□□ 0.23
RFC1P35251 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.49■□□□□ 0.23
RFC1P35251 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.49■□□□□ 0.23
RFC1P35251 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.49■□□□□ 0.23
RFC1P35251 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.49■□□□□ 0.23
RFC1P35251 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.49■□□□□ 0.23
RFC1P35251 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.49■□□□□ 0.23
RFC1P35251 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.49■□□□□ 0.23
RFC1P35251 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.49■□□□□ 0.23
RFC1P35251 AL109936.8-201ENST00000641772 604 ntBASIC16.49■□□□□ 0.23
RFC1P35251 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.49■□□□□ 0.23
RFC1P35251 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.49■□□□□ 0.23
RFC1P35251 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.49■□□□□ 0.23
RFC1P35251 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.49■□□□□ 0.23
RFC1P35251 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFC1P35251 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RFC1P35251 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC1P35251 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFC1P35251 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.48■□□□□ 0.23
RFC1P35251 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 TSSK5P-201ENST00000423978 907 ntBASIC16.48■□□□□ 0.23
RFC1P35251 RPL13P2-201ENST00000440687 659 ntBASIC16.48■□□□□ 0.23
RFC1P35251 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
RFC1P35251 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC1P35251 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.48■□□□□ 0.23
RFC1P35251 AC092183.1-201ENST00000469884 875 ntBASIC16.48■□□□□ 0.23
RFC1P35251 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.48■□□□□ 0.23
RFC1P35251 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC1P35251 AC044860.1-202ENST00000559481 777 ntBASIC16.48■□□□□ 0.23
RFC1P35251 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RFC1P35251 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.48■□□□□ 0.23
RFC1P35251 LINC01115-203ENST00000606068 577 ntBASIC16.48■□□□□ 0.23
RFC1P35251 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
RFC1P35251 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC1P35251 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.48■□□□□ 0.23
RFC1P35251 AC023157.3-201ENST00000619086 2088 ntBASIC16.48■□□□□ 0.23
RFC1P35251 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC1P35251 AP002414.2-201ENST00000591780 3365 ntBASIC16.48■□□□□ 0.23
RFC1P35251 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFC1P35251 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.48■□□□□ 0.23
RFC1P35251 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.48■□□□□ 0.23
RFC1P35251 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RFC1P35251 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
RFC1P35251 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
RFC1P35251 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.47■□□□□ 0.23
RFC1P35251 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RFC1P35251 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms