Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ROCK2-206ENST00000462366 563 ntTSL 32.92□□□□□ -1.945e-10■□□□□ 10.7
RPS3P23396 BTF3-206ENST00000510787 610 ntTSL 215.66■□□□□ 0.13e-13■□□□□ 10.7
RPS3P23396 SREBF1-208ENST00000469356 1323 ntTSL 322.62■■□□□ 1.215e-8■□□□□ 10.7
RPS3P23396 SREBF1-210ENST00000471445 936 ntTSL 220.27■□□□□ 0.845e-8■□□□□ 10.7
RPS3P23396 SND1-216ENST00000492840 472 ntTSL 53.18□□□□□ -1.91e-6■□□□□ 10.6
RPS3P23396 EIF3H-204ENST00000518949 843 ntTSL 39.28□□□□□ -0.927e-7■□□□□ 10.6
RPS3P23396 EIF3H-205ENST00000518995 731 ntTSL 39.28□□□□□ -0.927e-7■□□□□ 10.6
RPS3P23396 EMP3-205ENST00000597057 406 ntTSL 211.66□□□□□ -0.544e-6■□□□□ 10.6
RPS3P23396 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.024e-6■□□□□ 10.6
RPS3P23396 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.674e-6■□□□□ 10.6
RPS3P23396 PPP2R2A-203ENST00000517754 2357 ntTSL 23.67□□□□□ -1.824e-6■□□□□ 10.6
RPS3P23396 FGFR4-215ENST00000513423 445 ntTSL 213.33□□□□□ -0.282e-11■□□□□ 10.6
RPS3P23396 SF3B1-208ENST00000470268 2003 ntTSL 24.63□□□□□ -1.677e-8■□□□□ 10.6
RPS3P23396 DTL-204ENST00000489149 815 ntTSL 24.48□□□□□ -1.694e-6■□□□□ 10.6
RPS3P23396 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.381e-9■□□□□ 10.6
RPS3P23396 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.251e-9■□□□□ 10.6
RPS3P23396 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.361e-9■□□□□ 10.6
RPS3P23396 FCGRT-213ENST00000598491 578 ntTSL 514.17□□□□□ -0.142e-10■□□□□ 10.6
RPS3P23396 SLC26A6-220ENST00000489483 5682 ntTSL 213.75□□□□□ -0.212e-7■□□□□ 10.6
RPS3P23396 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.7□□□□□ -0.222e-7■□□□□ 10.6
RPS3P23396 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.25□□□□□ -0.292e-7■□□□□ 10.6
RPS3P23396 SLC26A6-201ENST00000307364 2586 ntTSL 1 (best)12.9□□□□□ -0.342e-7■□□□□ 10.6
RPS3P23396 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.42e-7■□□□□ 10.6
RPS3P23396 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.51□□□□□ -0.412e-7■□□□□ 10.6
RPS3P23396 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.412e-7■□□□□ 10.6
RPS3P23396 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.48□□□□□ -0.412e-7■□□□□ 10.6
RPS3P23396 SLC26A6-217ENST00000480524 2727 ntTSL 1 (best)12.16□□□□□ -0.462e-7■□□□□ 10.6
RPS3P23396 FCGRT-205ENST00000593431 582 ntTSL 318.93■□□□□ 0.625e-7■□□□□ 10.6
RPS3P23396 FCGRT-203ENST00000452439 1351 ntTSL 217.3■□□□□ 0.365e-7■□□□□ 10.6
RPS3P23396 FCGRT-212ENST00000598319 1888 ntTSL 516■□□□□ 0.155e-7■□□□□ 10.6
RPS3P23396 FCGRT-215ENST00000598936 870 ntTSL 315.15■□□□□ 0.025e-7■□□□□ 10.6
RPS3P23396 FCGRT-211ENST00000598076 676 ntTSL 313.12□□□□□ -0.317e-7■□□□□ 10.6
RPS3P23396 RCC1L-204ENST00000616051 1610 ntTSL 227.27■■□□□ 1.962e-6■□□□□ 10.6
RPS3P23396 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.97■■□□□ 1.752e-6■□□□□ 10.6
RPS3P23396 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.33■■□□□ 1.496e-6■□□□□ 10.6
RPS3P23396 HAGH-211ENST00000569339 820 ntTSL 323.66■■□□□ 1.386e-6■□□□□ 10.6
RPS3P23396 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.43■■□□□ 1.346e-11■□□□□ 10.6
RPS3P23396 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.212e-6■□□□□ 10.6
RPS3P23396 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.156e-6■□□□□ 10.6
RPS3P23396 ABCC10-206ENST00000443426 774 ntTSL 220.65■□□□□ 0.96e-6■□□□□ 10.6
RPS3P23396 CDK16-217ENST00000522234 1679 ntTSL 220.58■□□□□ 0.886e-6■□□□□ 10.6
RPS3P23396 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.832e-6■□□□□ 10.6
RPS3P23396 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.836e-6■□□□□ 10.6
RPS3P23396 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.01■□□□□ 0.796e-6■□□□□ 10.6
RPS3P23396 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.766e-6■□□□□ 10.6
RPS3P23396 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.62■□□□□ 0.732e-6■□□□□ 10.6
RPS3P23396 CDK16-216ENST00000520893 943 ntTSL 519.03■□□□□ 0.646e-6■□□□□ 10.6
RPS3P23396 CDK16-208ENST00000517426 1574 ntTSL 518.34■□□□□ 0.536e-6■□□□□ 10.6
RPS3P23396 CLN3-254ENST00000637050 1684 ntTSL 518.28■□□□□ 0.526e-6■□□□□ 10.6
RPS3P23396 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.422e-6■□□□□ 10.6
RPS3P23396 CDK16-213ENST00000519758 991 ntTSL 317.46■□□□□ 0.396e-6■□□□□ 10.6
RPS3P23396 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.34■□□□□ 0.376e-6■□□□□ 10.6
RPS3P23396 CLN3-217ENST00000565354 759 ntTSL 516.86■□□□□ 0.296e-6■□□□□ 10.6
RPS3P23396 CLN3-252ENST00000636907 1679 ntTSL 216.74■□□□□ 0.276e-6■□□□□ 10.6
RPS3P23396 ABCC10-203ENST00000372515 933 ntTSL 516.73■□□□□ 0.276e-6■□□□□ 10.6
RPS3P23396 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.216e-6■□□□□ 10.6
RPS3P23396 TIMM50-203ENST00000594583 680 ntTSL 316.3■□□□□ 0.26e-6■□□□□ 10.6
RPS3P23396 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.196e-6■□□□□ 10.6
RPS3P23396 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.182e-6■□□□□ 10.6
RPS3P23396 RPS23-202ENST00000503605 595 ntTSL 316.16■□□□□ 0.184e-30■□□□□ 10.6
RPS3P23396 CLN3-211ENST00000564091 790 ntTSL 516.07■□□□□ 0.166e-6■□□□□ 10.6
RPS3P23396 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.07■□□□□ 0.166e-6■□□□□ 10.6
RPS3P23396 PLEKHB1-213ENST00000541597 685 ntTSL 315.78■□□□□ 0.122e-6■□□□□ 10.6
RPS3P23396 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.096e-6■□□□□ 10.6
RPS3P23396 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.066e-6■□□□□ 10.6
RPS3P23396 TOB1-203ENST00000509385 889 ntTSL 215.02■□□□□ -06e-6■□□□□ 10.6
RPS3P23396 CDK16-215ENST00000520295 573 ntTSL 414.86□□□□□ -0.036e-6■□□□□ 10.6
RPS3P23396 HAGH-204ENST00000564445 864 ntTSL 314.8□□□□□ -0.046e-6■□□□□ 10.6
RPS3P23396 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.52□□□□□ -0.086e-6■□□□□ 10.6
RPS3P23396 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.132e-6■□□□□ 10.6
RPS3P23396 CDK16-209ENST00000517479 520 ntTSL 414.14□□□□□ -0.156e-6■□□□□ 10.6
RPS3P23396 ACSL4-212ENST00000514500 696 ntTSL 514.08□□□□□ -0.163e-7■□□□□ 10.6
RPS3P23396 PLEKHB1-212ENST00000540431 579 ntTSL 514.08□□□□□ -0.162e-6■□□□□ 10.6
RPS3P23396 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.166e-6■□□□□ 10.6
RPS3P23396 CDK16-218ENST00000522883 601 ntTSL 413.93□□□□□ -0.186e-6■□□□□ 10.6
RPS3P23396 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.92□□□□□ -0.186e-6■□□□□ 10.6
RPS3P23396 WDR6-219ENST00000498023 626 ntTSL 213.76□□□□□ -0.216e-6■□□□□ 10.6
RPS3P23396 AC138894.1-212ENST00000637745 879 ntTSL 513.65□□□□□ -0.226e-6■□□□□ 10.6
RPS3P23396 RCC1L-203ENST00000615250 592 ntTSL 413.55□□□□□ -0.242e-6■□□□□ 10.6
RPS3P23396 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.246e-6■□□□□ 10.6
RPS3P23396 CLN3-249ENST00000636685 801 ntTSL 513.42□□□□□ -0.266e-6■□□□□ 10.6
RPS3P23396 SAFB2-208ENST00000591120 1298 ntTSL 213.01□□□□□ -0.336e-6■□□□□ 10.6
RPS3P23396 CDK16-210ENST00000517997 562 ntTSL 412.88□□□□□ -0.356e-6■□□□□ 10.6
RPS3P23396 MMS19-219ENST00000495415 1879 ntTSL 512.77□□□□□ -0.376e-6■□□□□ 10.6
RPS3P23396 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.416e-6■□□□□ 10.6
RPS3P23396 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.436e-6■□□□□ 10.6
RPS3P23396 CDK16-204ENST00000457458 3158 ntTSL 1 (best) BASIC12.18□□□□□ -0.466e-6■□□□□ 10.6
RPS3P23396 RBM8A-202ENST00000484825 542 ntTSL 511.89□□□□□ -0.516e-6■□□□□ 10.6
RPS3P23396 RBM8A-209ENST00000634161 464 ntTSL 311.6□□□□□ -0.556e-6■□□□□ 10.6
RPS3P23396 MMS19-207ENST00000434538 2164 ntTSL 211.51□□□□□ -0.576e-6■□□□□ 10.6
RPS3P23396 RBM8A-203ENST00000498663 764 ntTSL 211.29□□□□□ -0.66e-6■□□□□ 10.6
RPS3P23396 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.636e-6■□□□□ 10.6
RPS3P23396 DLST-201ENST00000238671 1464 ntTSL 211.07□□□□□ -0.646e-6■□□□□ 10.6
RPS3P23396 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC10.91□□□□□ -0.666e-6■□□□□ 10.6
RPS3P23396 DLST-202ENST00000334220 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.716e-6■□□□□ 10.6
RPS3P23396 ARPP19-212ENST00000569281 661 ntAPPRIS P1 TSL 4 BASIC9.82□□□□□ -0.846e-6■□□□□ 10.6
RPS3P23396 TOB1-201ENST00000268957 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.876e-6■□□□□ 10.6
RPS3P23396 DLST-204ENST00000554612 1479 ntTSL 29.42□□□□□ -0.96e-6■□□□□ 10.6
RPS3P23396 DLST-208ENST00000555190 803 ntTSL 49.21□□□□□ -0.946e-6■□□□□ 10.6
RPS3P23396 ARPP19-203ENST00000561971 799 ntTSL 3 BASIC9.08□□□□□ -0.966e-6■□□□□ 10.6
Retrieved 100 of 24,271 protein–RNA pairs in 372.4 ms