Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CGB3P0DN86 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CGB3P0DN86 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 ZBED1P1-201ENST00000502364 1930 ntBASIC12.78□□□□□ -0.36
CGB3P0DN86 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.78□□□□□ -0.36
CGB3P0DN86 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.78□□□□□ -0.36
CGB3P0DN86 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.78□□□□□ -0.36
CGB3P0DN86 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.78□□□□□ -0.36
CGB3P0DN86 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.78□□□□□ -0.36
CGB3P0DN86 AL512638.1-201ENST00000457493 794 ntBASIC12.78□□□□□ -0.36
CGB3P0DN86 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.78□□□□□ -0.36
CGB3P0DN86 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.78□□□□□ -0.36
CGB3P0DN86 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.78□□□□□ -0.36
CGB3P0DN86 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 AC004790.1-201ENST00000612686 536 ntBASIC12.78□□□□□ -0.36
CGB3P0DN86 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.78□□□□□ -0.36
CGB3P0DN86 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 CLK3P2-201ENST00000427566 1453 ntBASIC12.78□□□□□ -0.36
CGB3P0DN86 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.78□□□□□ -0.36
CGB3P0DN86 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CGB3P0DN86 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CGB3P0DN86 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.78□□□□□ -0.36
CGB3P0DN86 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.78□□□□□ -0.36
CGB3P0DN86 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
CGB3P0DN86 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CGB3P0DN86 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CGB3P0DN86 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.77□□□□□ -0.37
CGB3P0DN86 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.77□□□□□ -0.37
CGB3P0DN86 CYMP-203ENST00000474680 1263 ntBASIC12.77□□□□□ -0.37
CGB3P0DN86 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.77□□□□□ -0.37
CGB3P0DN86 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.77□□□□□ -0.37
CGB3P0DN86 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.77□□□□□ -0.37
CGB3P0DN86 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.77□□□□□ -0.37
CGB3P0DN86 RARRES2P5-201ENST00000564013 466 ntBASIC12.77□□□□□ -0.37
CGB3P0DN86 AC011467.4-201ENST00000594891 528 ntBASIC12.77□□□□□ -0.37
CGB3P0DN86 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.77□□□□□ -0.37
CGB3P0DN86 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.77□□□□□ -0.37
CGB3P0DN86 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CGB3P0DN86 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
CGB3P0DN86 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CGB3P0DN86 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms