Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.93□□□□□ -0.18
ERCC1P07992 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.93□□□□□ -0.18
ERCC1P07992 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.93□□□□□ -0.18
ERCC1P07992 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.93□□□□□ -0.18
ERCC1P07992 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.93□□□□□ -0.18
ERCC1P07992 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.93□□□□□ -0.18
ERCC1P07992 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.93□□□□□ -0.18
ERCC1P07992 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.93□□□□□ -0.18
ERCC1P07992 AC073592.8-201ENST00000624126 511 ntBASIC13.93□□□□□ -0.18
ERCC1P07992 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.93□□□□□ -0.18
ERCC1P07992 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.93□□□□□ -0.18
ERCC1P07992 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.93□□□□□ -0.18
ERCC1P07992 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
ERCC1P07992 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ERCC1P07992 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
ERCC1P07992 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.93□□□□□ -0.18
ERCC1P07992 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ERCC1P07992 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
ERCC1P07992 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.93□□□□□ -0.18
ERCC1P07992 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ERCC1P07992 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
ERCC1P07992 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ERCC1P07992 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.92□□□□□ -0.18
ERCC1P07992 AC006486.2-201ENST00000624246 2199 ntBASIC13.92□□□□□ -0.18
ERCC1P07992 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ERCC1P07992 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ERCC1P07992 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 AL589702.1-201ENST00000641229 1509 ntBASIC13.92□□□□□ -0.18
ERCC1P07992 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.92□□□□□ -0.18
ERCC1P07992 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.92□□□□□ -0.18
ERCC1P07992 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.92□□□□□ -0.18
ERCC1P07992 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.92□□□□□ -0.18
ERCC1P07992 MIR4745-201ENST00000577608 62 ntBASIC13.92□□□□□ -0.18
ERCC1P07992 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.92□□□□□ -0.18
ERCC1P07992 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.92□□□□□ -0.18
ERCC1P07992 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ERCC1P07992 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.92□□□□□ -0.18
ERCC1P07992 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ERCC1P07992 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 FO538757.1-201ENST00000623083 1397 ntBASIC13.92□□□□□ -0.18
ERCC1P07992 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.92□□□□□ -0.18
ERCC1P07992 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
ERCC1P07992 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.92□□□□□ -0.18
ERCC1P07992 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.92□□□□□ -0.18
ERCC1P07992 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ERCC1P07992 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 AL109954.1-202ENST00000564051 2148 ntBASIC13.91□□□□□ -0.18
ERCC1P07992 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.91□□□□□ -0.18
ERCC1P07992 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ERCC1P07992 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.91□□□□□ -0.18
ERCC1P07992 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.91□□□□□ -0.18
ERCC1P07992 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ERCC1P07992 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms