Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.43□□□□□ -0.42
IFNA1P01562 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.42□□□□□ -0.42
IFNA1P01562 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 OR2I1P-208ENST00000641137 4948 ntBASIC12.42□□□□□ -0.42
IFNA1P01562 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.42□□□□□ -0.42
IFNA1P01562 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.42□□□□□ -0.42
IFNA1P01562 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
IFNA1P01562 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.42□□□□□ -0.42
IFNA1P01562 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 MINOS1P3-201ENST00000457048 203 ntBASIC12.42□□□□□ -0.42
IFNA1P01562 SNORA78-201ENST00000459373 127 ntBASIC12.42□□□□□ -0.42
IFNA1P01562 AC096582.2-201ENST00000510860 516 ntBASIC12.42□□□□□ -0.42
IFNA1P01562 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.42□□□□□ -0.42
IFNA1P01562 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 AC021097.1-201ENST00000607902 574 ntBASIC12.42□□□□□ -0.42
IFNA1P01562 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.42□□□□□ -0.42
IFNA1P01562 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
IFNA1P01562 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
IFNA1P01562 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
IFNA1P01562 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
IFNA1P01562 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
IFNA1P01562 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 AL928921.2-201ENST00000641325 2442 ntBASIC12.41□□□□□ -0.42
IFNA1P01562 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 AC107918.4-201ENST00000641966 3141 ntBASIC12.41□□□□□ -0.42
IFNA1P01562 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.41□□□□□ -0.42
IFNA1P01562 AL645929.1-201ENST00000420084 975 ntBASIC12.41□□□□□ -0.42
IFNA1P01562 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 AL139424.1-201ENST00000607572 797 ntBASIC12.41□□□□□ -0.42
IFNA1P01562 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms