Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.79■□□□□ 0.28
CSPG5O95196 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.79■□□□□ 0.28
CSPG5O95196 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.79■□□□□ 0.28
CSPG5O95196 AC104306.2-201ENST00000451877 341 ntBASIC16.79■□□□□ 0.28
CSPG5O95196 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.79■□□□□ 0.28
CSPG5O95196 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CSPG5O95196 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.79■□□□□ 0.28
CSPG5O95196 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.79■□□□□ 0.28
CSPG5O95196 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.79■□□□□ 0.28
CSPG5O95196 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.79■□□□□ 0.28
CSPG5O95196 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.79■□□□□ 0.28
CSPG5O95196 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.79■□□□□ 0.28
CSPG5O95196 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CSPG5O95196 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG5O95196 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.79■□□□□ 0.28
CSPG5O95196 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.79■□□□□ 0.28
CSPG5O95196 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.78■□□□□ 0.28
CSPG5O95196 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CSPG5O95196 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CSPG5O95196 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.78■□□□□ 0.28
CSPG5O95196 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.78■□□□□ 0.28
CSPG5O95196 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.78■□□□□ 0.28
CSPG5O95196 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.78■□□□□ 0.28
CSPG5O95196 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.78■□□□□ 0.28
CSPG5O95196 RHOQP1-201ENST00000555758 579 ntBASIC16.78■□□□□ 0.28
CSPG5O95196 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.78■□□□□ 0.28
CSPG5O95196 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.78■□□□□ 0.28
CSPG5O95196 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CSPG5O95196 RHOXF1P1-202ENST00000635473 501 ntBASIC16.78■□□□□ 0.28
CSPG5O95196 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CSPG5O95196 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.78■□□□□ 0.28
CSPG5O95196 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.78■□□□□ 0.28
CSPG5O95196 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.78■□□□□ 0.28
CSPG5O95196 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG5O95196 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.77■□□□□ 0.28
CSPG5O95196 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.77■□□□□ 0.28
CSPG5O95196 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CSPG5O95196 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.77■□□□□ 0.28
CSPG5O95196 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CSPG5O95196 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.77■□□□□ 0.28
CSPG5O95196 AL592424.1-201ENST00000563624 1536 ntBASIC16.77■□□□□ 0.28
CSPG5O95196 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CSPG5O95196 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.77■□□□□ 0.28
CSPG5O95196 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.77■□□□□ 0.28
CSPG5O95196 FAM86HP-204ENST00000513466 959 ntBASIC16.77■□□□□ 0.28
CSPG5O95196 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 AP001063.1-201ENST00000568332 529 ntBASIC16.77■□□□□ 0.28
CSPG5O95196 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.77■□□□□ 0.28
CSPG5O95196 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CSPG5O95196 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSPG5O95196 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.77■□□□□ 0.28
CSPG5O95196 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CSPG5O95196 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms